Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903015.1_cds_XP_016452988.1_47158
CDS Infomation

[gene=LOC107777472] [db_xref=GeneID:107777472] [protein=probable protein phosphatase 2C 24] [protein_id=XP_016452988.1] [location=join(31005..31493,31943..32257,32381..32486,32605..32933)] [gbkey=CDS]
Sequence

ATGGCAGAGGTCTGCTCTGGAGTAGTCACTGAAACCGAGGCATCGCCGCCGTGCGAGTCA
AGTTCACGGGCGTCGAGGCGGAGGAGAATGGAGCTCCGCAAGTTAAAATTTATTGCCGGT
GTAACTCCACCAGAAACAGAGAACGGAATAATTAAACGTCCAAAATTAGAGCTTTGTTCC
ACCTCTGTTTCAAGATTCTGTGATAACGCTGTAGACAATTCTAGCACCGACGATGAAGAC
CAAGTGAGATTAGTGACTAAAGGGTCACCGCCAACTATTATTTTGGCTCCAATTTTGAGT
CCTTTGAATAATTCGACTCTTCTTGTTCAGTCAGTGGCGAGTCCAAAATTCGGGTTCGCC
TCAGTTTGTGGACGGAGGAGAGATATGGAAGATGCGGTGGCGATTCATCCATCTTTTTGC
CAAATGAAACAGGAAAACAGTGCAGAATTGCATTACTTTGCCGTATATGATGGTCATGGA
TGTTCTCATGTTGCGACGAAGTGTGAAGAGCGATTACACGAGCTGGTGAAAGAAGAGCTG
GAAAATAACGAAGGAAATGACGAGTGGGAGCTTGCAATGGACCGAAGCTTTAATCGTATG
GACAAGGAAGTAATTGCATGGAACAAGAGCATGATCCGTGCCACGTGTCGGTGCGAGCTT
CATACGCCGGAATGTGACGCCGTCGGTTCAACGGCGGTAGTTGCTGTTGTAACGGCCGAT
AAGATTATCGTTGCCAATTGTGGCGATTCTAGAGCTGTTCTTTGCCGAAATGGCAAAGCC
ATCCCTCTCTCTAACGATCAAAAGCCGGATCGTCCAGATGAGCTAAACCGGATTCAAGAA
GCTGGTGGCAGAGTAATTTATTGGGATGGTCCTCGCGTTTCAGGCGTTTTGGCTATGTCA
AGAGCCATTGGTGATAACTATTTGAAGCCGTATGTGATATGCGAGCCAGAGGTGACAATA
ACGGATCGAACGGCGGAAGATGACTGTTTAATTCTGGCAAGCGACGGATTGTGGGATGTA
GTGTCAAACGATACTGCATGCGGCGTTGCCGGAATGTGCCTGAAAGGGAAGGCACCTGTA
TCGACTGCGGCGGCATCTATGCCGGAAAATGTAGCCGGCGGGGAGAATCCCGACCAGAGT
TGCTCCGATGCGTCTATGCTTTTGACTAAACTAGCCCTGGCGAGGCGGAGTTCGGACAAC
GTCAGCGTTGTCGTGGTTGATCTGAGGAGGAACTCCTAG

Peptide Sequence

PEP ID

XP_016452988.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 24 [Nicotiana tabacum]
Sequence

MAEVCSGVVTETEASPPCESSSRASRRRRMELRKLKFIAGVTPPETENGIIKRPKLELCS
TSVSRFCDNAVDNSSTDDEDQVRLVTKGSPPTIILAPILSPLNNSTLLVQSVASPKFGFA
SVCGRRRDMEDAVAIHPSFCQMKQENSAELHYFAVYDGHGCSHVATKCEERLHELVKEEL
ENNEGNDEWELAMDRSFNRMDKEVIAWNKSMIRATCRCELHTPECDAVGSTAVVAVVTAD
KIIVANCGDSRAVLCRNGKAIPLSNDQKPDRPDELNRIQEAGGRVIYWDGPRVSGVLAMS
RAIGDNYLKPYVICEPEVTITDRTAEDDCLILASDGLWDVVSNDTACGVAGMCLKGKAPV
STAAASMPENVAGGENPDQSCSDASMLLTKLALARRSSDNVSVVVVDLRRNS

Transcript Sequence

Gene sequence data has not been registered.